PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC034183.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 173aa    MW: 19563.7 Da    PI: 10.1859
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC034183.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.4e-102376155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                  rr+  +++E++RR+r+++ ++ L +llP+ +   +s+   s  +   +A+ YIk L+
  EcC034183.10 23 RRTERKIIEKNRRNRMKHLYSVLNSLLPSqP---SSQEaKSLPDQIDEAILYIKGLE 76
                  79999************************66...556568888***********985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.55E-42080No hitNo description
SuperFamilySSF474591.03E-102098IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.4962275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-62375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-92392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-42881IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MALSLVNVIG KEMDRGLQPS SPRRTERKII EKNRRNRMKH LYSVLNSLLP SQPSSQEAKS  60
LPDQIDEAIL YIKGLEKAVK EAKDKKEKLM GKKRPSPSPS PSSNTLEAIK SPQIEIGVRD  120
SSLEVILTSG LHDQFIFLEI LRMLHEEKVE VLNANFSVVE NSVYHLVHAK VRT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035765.11e-118PREDICTED: transcription factor bHLH94-like
TrEMBLA0A059A0A51e-118A0A059A0A5_EUCGR; Uncharacterized protein
STRINGPOPTR_0011s05320.14e-47(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-18bHLH family protein